Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015761.1 Corchorus capsularis cultivar CVL-1 contig15782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40617

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
995--1021
2
13.5
2
100
0
54
51
0
0
48
1.00
1567--1661
36
2.6
37
83
3
111
42
7
20
30
1.79
5791--5862
31
2.3
32
88
9
112
38
31
18
11
1.85
7261--7451
38
5.0
38
96
0
346
19
36
19
23
1.95
10223--10259
2
18.5
2
94
0
65
51
0
2
45
1.15
11060--11095
5
7.6
5
90
9
58
0
16
0
83
0.65
11060--11094
9
3.8
9
85
7
52
0
17
0
82
0.66
11060--11096
14
2.6
14
95
0
65
0
16
0
83
0.64
13186--13255
33
2.2
32
89
5
106
18
15
17
48
1.81
13426--13514
29
3.1
30
83
6
121
37
28
19
15
1.92
23819--23844
13
2.0
13
100
0
52
15
23
0
61
1.33
34064--34119
28
2.0
29
96
3
105
25
7
16
51
1.69
34277--34314
19
2.0
19
94
0
67
36
15
18
28
1.92
39517--39582
33
2.0
33
84
0
87
48
12
28
10
1.74

Tables:   1

The End!