Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015762.1 Corchorus capsularis cultivar CVL-1 contig15783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55885

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73--159
2
46.5
2
72
17
71
43
4
2
49
1.35
75--143
7
9.7
7
76
9
68
44
1
2
50
1.25
72--149
35
2.2
36
82
13
90
43
2
2
51
1.29
147--215
4
16.8
4
88
5
102
27
20
1
50
1.56
6716--6786
23
3.1
23
62
18
58
53
22
9
14
1.69
13695--13795
32
3.1
32
85
1
103
18
8
34
37
1.82
13939--13977
20
2.0
20
85
10
53
35
5
5
53
1.45
14324--14387
15
4.4
14
75
7
65
32
6
10
50
1.63
19538--19931
200
2.0
197
94
1
698
11
34
31
22
1.90
28521--28550
13
2.3
13
94
0
51
76
0
16
6
0.99
48498--48689
95
2.0
95
100
0
384
32
22
22
21
1.98
52651--52680
13
2.3
13
94
0
51
40
10
33
16
1.82
55280--55316
19
2.0
18
89
5
56
40
8
21
29
1.82

Tables:   1

The End!