Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015763.1 Corchorus capsularis cultivar CVL-1 contig15784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41229

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2272--2603
166
2.0
165
98
0
646
38
16
14
29
1.89
20435--20462
7
4.0
7
100
0
56
0
42
0
57
0.99
23969--24032
28
2.2
29
88
2
94
62
1
9
26
1.35
24270--24309
13
3.1
13
85
0
53
25
15
15
45
1.84
28369--28547
41
4.4
40
82
2
196
35
13
15
35
1.86
28851--29011
78
2.1
78
100
0
322
47
16
3
32
1.65
28985--29015
11
2.8
11
90
0
53
35
22
9
32
1.87
29008--29047
13
3.1
13
85
0
53
25
15
15
45
1.84
29190--29230
13
3.1
14
77
22
52
73
0
0
26
0.84
29176--29230
22
2.5
22
85
8
76
70
1
1
25
1.06

Tables:   1

The End!