Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015764.1 Corchorus capsularis cultivar CVL-1 contig15785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29421

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3032--3311
141
2.0
139
96
1
515
37
13
14
34
1.86
4266--4298
3
11.3
3
93
6
59
33
36
0
30
1.58
14222--14260
19
2.2
17
86
9
51
69
5
12
12
1.35
14222--14278
18
3.2
17
82
7
51
68
3
14
14
1.34
14814--14870
29
1.9
30
85
7
80
33
21
7
38
1.80
18177--18205
2
14.5
2
100
0
58
48
0
0
51
1.00
18553--18586
13
2.5
14
90
4
52
8
11
8
70
1.34
23400--23479
10
8.2
10
71
15
60
56
3
0
40
1.17
23408--23466
18
3.5
17
74
17
52
54
5
0
40
1.23

Tables:   1

The End!