Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015768.1 Corchorus capsularis cultivar CVL-1 contig15789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14972

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
789--837
21
2.3
22
83
13
59
40
12
14
32
1.83
2783--2838
29
2.0
28
85
3
76
39
5
19
35
1.75
3810--3847
18
2.1
19
90
5
60
23
10
18
47
1.79
8057--8167
47
2.4
47
98
0
213
52
7
38
1
1.40
14020--14148
56
2.3
56
100
0
258
28
25
6
39
1.80
14128--14346
35
6.3
35
76
13
186
32
21
9
36
1.85

Tables:   1

The End!