Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015770.1 Corchorus capsularis cultivar CVL-1 contig15791, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12063

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2323--2348
2
13.0
2
100
0
52
50
0
0
50
1.00
3315--3393
30
2.6
30
84
6
97
54
7
13
24
1.65
3389--3444
22
2.5
22
82
5
60
50
3
23
23
1.65
3385--3677
129
2.3
128
93
0
453
53
4
21
20
1.64
3477--3545
22
3.1
21
83
6
75
57
2
21
17
1.52
3569--3606
20
1.9
20
89
10
60
55
5
18
21
1.62
3603--3644
8
5.4
8
80
5
50
59
2
21
16
1.48
7839--7905
3
22.7
3
96
3
127
67
0
0
32
0.91

Tables:   1

The End!