Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015773.1 Corchorus capsularis cultivar CVL-1 contig15794, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9427

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5498--5593
22
4.5
22
75
22
80
21
17
6
54
1.65
5495--5633
64
2.2
64
83
10
169
20
18
5
54
1.64
5864--5925
16
3.8
16
78
14
63
25
16
8
50
1.72
5883--6189
55
5.6
55
94
0
506
25
17
7
49
1.72
7007--7335
49
6.5
49
90
6
462
38
15
5
40
1.70

Tables:   1

The End!