Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015774.1 Corchorus capsularis cultivar CVL-1 contig15795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35302

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1320
83
2.0
80
85
6
218
34
7
9
48
1.63
1723--1748
2
13.0
2
100
0
52
50
0
0
50
1.00
6982--7012
7
4.6
7
96
4
55
0
0
9
90
0.46
6972--7012
14
2.9
13
86
13
55
0
0
12
87
0.53
7721--7782
29
2.1
30
90
3
99
8
24
41
25
1.82
12565--13000
215
2.0
215
98
0
845
31
27
22
18
1.97
16541--16844
150
2.0
150
99
0
599
30
10
15
42
1.81
17386--17475
45
2.0
45
86
0
126
26
22
16
34
1.95
18823--18878
28
2.0
28
93
3
96
42
19
16
21
1.89
21392--21509
60
2.0
59
83
6
150
38
16
11
32
1.86
28381--28425
4
11.2
4
90
9
74
0
24
0
75
0.80
35272--35302
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!