Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015775.1 Corchorus capsularis cultivar CVL-1 contig15796, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21797

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6055--6108
27
2.0
27
100
0
108
33
7
14
44
1.73
12605--12722
33
3.5
33
93
3
184
11
30
39
17
1.86
12615--12701
17
5.2
16
67
16
61
9
28
42
19
1.82
12773--12816
21
2.1
21
86
0
61
38
11
27
22
1.88
13184--13235
26
2.0
26
85
7
70
51
23
11
13
1.73
13358--13389
13
2.4
14
94
5
57
34
0
65
0
0.93
17093--17123
11
2.8
11
95
0
53
45
9
3
41
1.53
18186--18225
20
1.9
20
85
10
53
55
2
40
2
1.27
18285--18345
18
3.0
21
75
20
67
52
0
0
47
1.00
19816--19863
24
2.0
24
92
8
80
45
4
43
6
1.48
20251--20295
19
2.4
19
85
3
65
35
37
8
17
1.81
21075--21112
18
2.1
19
85
5
51
42
28
5
23
1.76

Tables:   1

The End!