Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001578.1 Corchorus capsularis cultivar CVL-1 contig01578, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1597

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108--142
18
1.9
18
100
0
70
42
0
5
51
1.25
141--215
21
3.2
21
70
22
69
33
6
8
52
1.57
142--224
24
3.4
24
71
21
82
33
7
8
50
1.60
126--250
49
2.6
49
100
0
250
35
5
8
51
1.55
166--249
25
3.4
25
68
21
77
33
5
8
52
1.56
1082--1123
17
2.4
18
84
11
61
61
4
2
30
1.29
1092--1153
23
2.6
23
94
5
106
67
3
0
29
1.06

Tables:   1

The End!