Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015781.1 Corchorus capsularis cultivar CVL-1 contig15802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44404

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4250--4292
2
21.5
2
86
9
61
48
4
0
46
1.22
11058--11107
25
2.0
25
92
0
82
54
10
4
32
1.52
16613--16637
13
1.9
13
100
0
50
56
0
0
44
0.99
17690--18009
161
2.0
160
80
7
362
30
19
15
35
1.93
19890--19919
15
2.0
15
93
0
51
30
0
0
70
0.88
21387--21432
23
2.0
23
100
0
92
13
34
21
30
1.91
22316--22361
23
2.0
23
100
0
92
13
34
21
30
1.91
31121--31227
33
3.2
32
81
2
106
8
28
38
25
1.85
31623--31696
38
2.0
36
86
5
103
32
8
10
48
1.67
32246--32288
23
1.9
22
90
4
68
39
4
11
44
1.62
32282--32318
16
2.3
16
95
0
65
43
10
8
37
1.69
33087--33118
2
16.0
2
93
0
55
46
0
0
53
1.00
34284--34317
2
17.0
2
100
0
68
50
0
0
50
1.00
34665--34726
29
2.1
30
87
3
90
40
17
3
38
1.66
34679--34739
29
2.1
29
84
6
79
37
14
3
44
1.62
36756--36797
21
2.0
21
90
0
66
38
23
11
26
1.90

Tables:   1

The End!