Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015785.1 Corchorus capsularis cultivar CVL-1 contig15806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38263

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8356--8380
2
12.5
2
100
0
50
48
0
0
52
1.00
16375--16407
5
6.4
5
96
3
57
81
18
0
0
0.68
20646--20678
14
2.3
15
89
5
50
0
3
15
81
0.80
21069--21102
2
17.0
2
100
0
68
50
0
0
50
1.00
21110--21265
57
2.6
58
85
8
199
26
14
19
39
1.90
32822--33097
110
2.5
109
91
6
439
38
10
1
48
1.49

Tables:   1

The End!