Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015787.1 Corchorus capsularis cultivar CVL-1 contig15808, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21908

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4095--4157
27
2.3
27
91
0
108
17
44
15
22
1.86
4960--4994
17
2.1
17
88
0
52
20
14
20
45
1.85
7009--7734
392
1.9
392
88
0
1094
29
20
20
29
1.98
10114--10150
14
2.6
15
83
12
51
37
0
0
62
0.96
17652--17791
71
2.0
71
100
0
280
45
11
8
35
1.71
20927--20961
13
2.6
13
90
4
52
0
2
34
62
1.10
21239--21299
29
2.1
29
87
0
86
36
6
14
42
1.72

Tables:   1

The End!