Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015808.1 Corchorus capsularis cultivar CVL-1 contig15829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17393

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--383
6
5.5
6
96
3
57
56
15
0
28
1.40
5546--5594
21
2.3
21
80
16
57
32
14
12
40
1.83
9420--9516
33
2.9
33
81
3
115
20
39
28
11
1.87
12470--12611
33
4.3
33
82
3
126
22
42
26
9
1.83
13928--13996
27
2.6
26
88
9
95
49
24
11
14
1.77
16305--16334
15
1.9
15
93
6
51
36
30
0
33
1.58

Tables:   1

The End!