Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015811.1 Corchorus capsularis cultivar CVL-1 contig15832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18623

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8383--8457
16
4.7
16
86
6
116
4
13
38
44
1.62
8445--8483
6
6.7
6
88
5
62
0
20
48
30
1.50
8447--8480
17
1.9
18
94
5
61
0
20
52
26
1.46
9247--9289
16
2.7
16
89
7
61
2
16
44
37
1.60
9224--9259
6
6.2
6
87
6
56
2
16
47
33
1.61
14071--14564
70
7.2
69
87
2
597
28
17
28
25
1.98
14071--14564
139
3.6
137
85
5
597
28
17
28
25
1.98
14088--14564
209
2.3
206
85
3
609
28
17
28
25
1.97
15126--15192
35
1.9
35
87
0
98
19
16
25
38
1.92
15341--15512
36
4.8
36
72
9
136
16
17
28
37
1.91
15341--15512
71
2.4
72
79
4
186
16
17
28
37
1.91
18319--18358
21
2.0
20
90
5
62
42
0
15
42
1.46
18300--18615
51
6.3
49
78
8
251
40
2
14
42
1.58
18450--18536
30
3.2
29
64
32
75
41
1
13
43
1.52
18469--18508
20
2.0
21
90
5
64
42
2
15
40
1.60

Tables:   1

The End!