Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015816.1 Corchorus capsularis cultivar CVL-1 contig15837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13721

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1481--1507
6
4.5
6
100
0
54
55
14
0
29
1.40
1504--1537
12
2.7
13
90
4
52
58
8
11
20
1.59
2447--2471
10
2.5
10
100
0
50
24
8
20
48
1.76
8983--9016
8
4.1
8
92
7
59
23
0
14
61
1.33
8983--9016
17
2.1
16
94
5
59
23
0
14
61
1.33
9977--10083
33
3.2
32
85
5
126
8
28
39
23
1.84
11330--11493
80
2.0
80
98
0
319
26
12
14
46
1.80
12283--12311
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!