Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015818.1 Corchorus capsularis cultivar CVL-1 contig15839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7333

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
771--821
14
3.6
14
97
0
93
43
5
31
19
1.75
880--941
6
10.5
6
78
3
72
67
0
25
6
1.14
1208--1584
206
1.8
205
91
2
623
22
24
30
22
1.99
1539--1604
32
2.0
33
91
2
107
21
19
25
33
1.97
2906--2968
30
2.1
31
85
5
85
19
34
12
33
1.89
3690--3730
5
8.4
5
89
5
66
19
2
0
78
0.87
4492--4527
17
2.0
19
89
10
58
61
11
5
22
1.50
6278--6474
16
12.6
16
75
9
147
7
21
37
32
1.82
6280--6428
48
3.1
48
79
8
171
8
22
36
32
1.85
6653--6734
42
2.0
42
97
0
155
37
6
14
41
1.71
7225--7270
22
2.0
23
87
4
67
13
15
26
45
1.82
7255--7333
16
4.9
16
78
6
79
8
16
36
37
1.80
7253--7333
32
2.5
32
82
7
94
8
17
35
38
1.80

Tables:   1

The End!