Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015822.1 Corchorus capsularis cultivar CVL-1 contig15843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16942

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5260--5319
30
2.0
30
87
12
88
28
21
30
20
1.98
6550--6577
12
2.3
12
100
0
56
25
42
25
7
1.80
9072--9129
30
1.9
30
86
6
82
24
27
17
31
1.97
9472--9588
33
3.5
33
91
1
180
41
17
9
31
1.81
9472--9613
66
2.2
66
83
2
169
42
19
9
28
1.81
9606--9710
33
3.2
33
76
2
113
46
20
7
24
1.77
10085--10160
33
2.3
33
79
0
80
22
40
27
9
1.84
11166--11256
33
2.8
33
84
3
112
4
29
41
24
1.74
11194--11272
33
2.4
33
86
0
104
7
30
40
21
1.81
14941--14974
8
4.1
8
85
7
50
23
2
14
58
1.50
15934--16016
33
2.5
31
79
12
78
8
26
40
24
1.83
15961--16024
33
1.9
33
87
0
92
6
31
39
23
1.79

Tables:   1

The End!