Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015829.1 Corchorus capsularis cultivar CVL-1 contig15850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19207

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
934--1002
32
2.2
32
91
0
111
14
11
37
36
1.83
1144--1184
20
2.0
20
86
9
57
36
4
4
53
1.44
1202--1274
16
4.6
16
79
6
78
8
12
31
47
1.70
1215--1273
31
1.9
31
92
0
100
10
11
27
50
1.71
1382--1457
33
2.3
33
86
0
98
17
34
26
22
1.96
1582--1620
7
5.7
7
87
6
62
46
38
0
15
1.46
2037--2118
7
12.1
7
72
12
73
17
1
39
42
1.57
2037--2118
20
4.1
20
78
12
96
17
1
39
42
1.57
2037--2118
13
6.1
14
73
12
73
17
1
39
42
1.57
3862--4071
33
6.5
33
81
4
189
20
32
33
12
1.91
3947--4003
29
2.0
29
92
0
96
15
29
42
12
1.84
3990--4104
32
3.6
32
89
2
169
23
34
26
15
1.95
14796--14850
25
2.2
23
78
15
56
16
14
1
67
1.32
17997--18042
21
2.2
21
96
0
83
34
17
10
36
1.85
18320--18371
3
17.3
3
95
0
95
67
0
1
30
1.02

Tables:   1

The End!