Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015835.1 Corchorus capsularis cultivar CVL-1 contig15856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11302

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
436--553
57
2.1
58
90
4
177
46
14
9
29
1.76
1401--1465
33
2.0
33
90
6
105
27
24
18
29
1.98
1758--2144
22
17.6
22
66
17
101
37
14
10
37
1.80
1918--1975
23
2.5
23
88
5
82
43
12
5
39
1.64
1874--1997
46
2.8
44
71
21
105
40
12
8
38
1.74
2002--2163
44
3.7
44
76
15
142
32
16
9
41
1.79
2269--2515
22
11.3
22
69
10
105
34
15
10
40
1.81
2289--2416
66
1.9
66
82
3
159
35
14
10
39
1.80
2595--2653
22
2.7
22
79
10
66
35
16
10
37
1.83
2699--2872
22
7.8
22
73
14
108
38
16
10
35
1.82
2744--2871
44
2.9
44
83
2
159
35
15
11
36
1.84
4484--4547
31
2.1
31
91
5
105
46
4
20
28
1.70

Tables:   1

The End!