Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015850.1 Corchorus capsularis cultivar CVL-1 contig15871, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20042

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191--354
82
2.0
82
88
4
242
27
15
25
32
1.95
1707--1752
21
2.1
21
84
4
56
39
21
8
30
1.84
4803--4845
22
2.0
22
90
0
68
44
16
27
11
1.82
5050--5110
15
4.3
14
78
15
63
57
0
8
34
1.29
5172--5302
67
2.0
67
95
0
235
20
22
18
38
1.93
8173--8205
12
2.8
12
100
0
66
24
12
27
36
1.91
14618--14725
22
4.9
22
89
4
139
13
22
38
25
1.91
15366--15413
15
2.9
17
75
12
64
16
27
16
39
1.90
15366--15432
36
2.0
33
88
11
100
16
28
16
38
1.90
15790--15823
16
2.1
16
94
0
59
17
2
0
79
0.86

Tables:   1

The End!