Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015864.1 Corchorus capsularis cultivar CVL-1 contig15885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49137

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9309--9347
19
2.0
20
85
5
53
74
0
15
10
1.07
10419--10457
18
2.1
19
85
4
53
7
7
7
76
1.15
11210--11332
31
4.0
31
77
2
122
28
14
18
38
1.90
13992--14025
16
2.2
15
89
5
50
2
11
5
79
1.02
17842--17905
18
3.6
18
84
0
83
9
1
48
40
1.45
17842--17911
36
1.9
36
85
0
95
10
2
47
40
1.52
17863--17916
18
3.0
18
83
0
63
12
3
46
37
1.60
21174--21461
109
2.6
109
91
5
449
37
10
1
49
1.48
25095--25217
59
2.1
60
92
3
205
30
11
18
39
1.86
29506--29543
19
2.0
19
100
0
76
31
10
15
42
1.81
32945--32980
17
2.1
17
89
0
54
30
5
2
61
1.33
37423--37458
1
36.0
1
100
0
72
0
0
0
100
0.00

Tables:   1

The End!