Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015873.1 Corchorus capsularis cultivar CVL-1 contig15894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45464

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90--121
2
16.0
2
100
0
64
50
0
0
50
1.00
14068--14149
35
2.3
36
75
16
89
30
21
13
34
1.92
14087--14155
35
1.9
36
91
2
113
28
23
10
37
1.87
28778--28805
14
2.0
14
100
0
56
35
14
7
42
1.73
29249--29288
21
2.0
19
85
9
53
67
12
20
0
1.22
39418--39478
31
2.0
31
100
0
122
36
22
13
27
1.92
42862--43059
93
2.2
91
83
8
242
21
22
18
37
1.94
45392--45443
23
2.3
22
78
12
52
51
0
11
36
1.38

Tables:   1

The End!