Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015881.1 Corchorus capsularis cultivar CVL-1 contig15902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20811

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
975--1414
219
2.0
219
100
0
880
34
21
14
29
1.93
19412--19530
36
3.4
34
80
15
138
27
16
8
47
1.76
19433--19545
32
3.4
32
76
17
122
27
18
6
47
1.72
19565--19936
36
10.1
36
79
8
356
24
20
8
45
1.79
19565--19937
110
3.4
111
89
3
531
24
20
8
45
1.79
19924--20097
11
15.2
12
76
15
140
9
22
8
59
1.56
19924--20097
12
15.2
12
76
15
147
9
22
8
59
1.56
19924--20097
24
7.6
23
78
11
162
9
22
8
59
1.56
20160--20357
33
5.9
33
76
12
181
27
12
13
46
1.79
20163--20367
68
3.0
68
88
1
279
26
12
14
46
1.80

Tables:   1

The End!