Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015883.1 Corchorus capsularis cultivar CVL-1 contig15904, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16963

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4038--4081
20
2.2
20
87
0
61
61
4
9
25
1.45
15599--15716
36
3.4
34
77
15
127
27
16
9
47
1.76
15619--15726
32
3.2
32
76
14
119
28
16
7
47
1.74
15751--16117
36
10.0
36
79
7
335
24
20
8
46
1.79
15931--16014
42
2.0
43
88
4
127
19
21
9
50
1.75
15751--16121
112
3.4
110
86
5
491
24
20
8
46
1.78
16110--16263
11
13.2
11
79
10
155
10
24
8
57
1.60
16110--16263
12
13.2
12
79
10
144
10
24
8
57
1.60
16110--16263
23
6.6
22
79
10
155
10
24
8
57
1.60
16110--16281
11
15.1
11
75
14
136
10
22
8
58
1.57
16346--16510
33
4.9
34
76
8
167
26
11
14
47
1.78
16348--16518
68
2.5
68
92
0
270
26
12
15
46
1.81

Tables:   1

The End!