Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015886.1 Corchorus capsularis cultivar CVL-1 contig15907, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31300

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2372--2437
16
4.2
16
84
3
80
42
40
10
6
1.64
2388--2431
15
2.9
15
86
6
61
43
43
11
2
1.53
2372--2431
31
1.9
31
89
0
93
43
41
10
5
1.60
2803--2850
26
1.9
24
87
8
69
58
0
8
33
1.28
3396--3429
2
16.0
2
88
11
50
47
2
2
47
1.32
3782--3819
15
2.4
17
87
12
55
36
39
13
10
1.79
5657--5697
21
2.0
21
85
0
55
19
39
9
31
1.84
15181--15240
29
2.1
29
100
0
120
21
16
10
51
1.73
17416--17442
6
4.5
6
100
0
54
55
14
0
29
1.40
17439--17473
13
2.7
13
95
0
61
60
8
11
20
1.57
24491--24517
6
4.5
6
100
0
54
55
14
0
29
1.40
24522--24548
13
2.1
13
100
0
54
62
7
7
22
1.46

Tables:   1

The End!