Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015890.1 Corchorus capsularis cultivar CVL-1 contig15911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27855

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
679--730
20
2.7
19
82
11
70
57
3
13
25
1.53
3025--3316
161
1.8
162
92
2
498
49
4
12
33
1.60
7158--7199
15
3.1
15
74
25
56
52
11
0
35
1.38
8105--8133
2
14.5
2
100
0
58
51
0
0
48
1.00
11090--11122
6
5.5
6
89
10
50
0
12
0
87
0.53
11083--11125
23
2.0
21
90
9
68
0
11
0
88
0.52
11080--11125
19
2.5
18
83
16
67
0
10
0
89
0.50
11080--11124
13
3.5
13
81
3
56
0
11
0
88
0.50
11083--11134
23
2.3
23
83
12
63
3
9
1
84
0.82
16179--16236
30
2.0
30
86
3
82
18
17
13
50
1.79
20526--20566
20
2.0
21
90
9
66
34
4
14
46
1.66
23077--23114
20
1.9
20
84
10
51
36
5
0
57
1.21
25100--25242
44
3.3
44
76
7
109
35
8
14
41
1.76
25123--25241
22
5.6
21
74
9
80
34
7
14
43
1.73
27315--27353
19
2.1
19
90
0
60
30
20
10
38
1.86

Tables:   1

The End!