Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015903.1 Corchorus capsularis cultivar CVL-1 contig15924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10934

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--508
16
2.5
16
91
0
62
37
10
17
35
1.83
816--860
21
2.1
21
84
8
56
20
8
6
64
1.44
787--996
86
2.5
84
94
1
357
16
17
9
57
1.65
3489--3526
11
3.5
11
85
10
51
57
2
0
39
1.12
3839--3922
41
2.0
42
95
2
152
45
8
4
41
1.55
4157--4209
19
2.7
19
82
2
70
18
22
0
58
1.39
4154--4208
20
2.8
20
83
2
76
18
23
0
58
1.39
5132--5864
199
3.7
197
85
3
851
33
12
19
34
1.90
7608--7787
87
2.1
87
89
2
272
50
8
9
32
1.65
7822--7870
20
2.4
19
80
12
53
48
8
10
32
1.66
8359--8411
20
2.6
20
72
3
52
49
1
13
35
1.53
9140--9223
42
2.0
40
93
4
141
51
8
3
36
1.50
9440--9478
3
13.0
3
100
0
78
66
0
0
33
0.92
10069--10138
36
1.9
36
91
5
115
61
4
8
25
1.43

Tables:   1

The End!