Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015904.1 Corchorus capsularis cultivar CVL-1 contig15925, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28354

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
623--674
26
2.0
26
85
7
70
13
9
26
50
1.72
2824--2853
2
15.0
2
100
0
60
50
0
0
50
1.00
4515--4553
6
6.5
6
87
0
60
20
46
0
33
1.51
9323--9455
65
2.0
65
98
0
257
43
22
8
25
1.81
12809--12857
2
26.5
2
84
15
70
53
0
0
46
1.00
12809--12856
7
6.9
7
90
9
64
54
0
0
45
0.99
12881--12910
5
5.8
5
92
7
51
23
0
16
60
1.36
12879--12910
16
1.9
17
93
6
57
25
0
15
59
1.36
15366--15400
11
3.2
11
83
0
52
77
17
5
0
0.96
16232--16509
108
2.7
104
88
5
384
40
9
8
42
1.67
17212--17330
2
59.5
2
100
0
238
0
0
50
49
1.00
17706--17732
13
2.1
13
100
0
54
22
37
7
33
1.82
27574--27685
34
3.0
38
84
8
142
30
12
10
46
1.76
27579--27685
39
3.0
33
80
16
124
29
13
10
46
1.76
27748--27823
27
2.8
27
81
2
80
14
13
28
43
1.83

Tables:   1

The End!