Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015906.1 Corchorus capsularis cultivar CVL-1 contig15927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27003

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1099
25
2.0
25
100
0
100
32
28
0
40
1.57
6326--6711
156
2.5
158
76
8
394
32
15
18
33
1.92
8327--8358
2
16.0
2
100
0
64
50
0
0
50
1.00
16733--16782
25
2.0
25
100
0
100
40
8
12
40
1.72
17840--17870
2
16.0
2
93
6
55
51
0
0
48
1.00
18355--18496
70
2.0
70
97
0
266
47
6
9
36
1.61
20374--20423
20
2.5
20
81
12
57
52
4
16
28
1.61
25907--25963
13
4.3
12
79
16
51
61
8
1
28
1.36

Tables:   1

The End!