Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015914.1 Corchorus capsularis cultivar CVL-1 contig15935, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32366

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1421--1449
12
2.3
13
94
5
51
27
24
27
20
1.99
4396--4550
55
2.7
57
89
6
226
50
5
18
25
1.68
4676--4731
24
2.3
25
90
3
87
41
3
19
35
1.69
4890--4945
16
3.6
16
80
2
69
51
3
17
26
1.62
4922--4969
25
1.9
25
95
0
87
50
4
20
25
1.66
9406--9504
22
4.5
21
75
7
83
41
8
12
38
1.72
9477--9548
36
2.0
36
100
0
144
44
5
11
38
1.63
9609--9693
22
4.0
21
71
15
68
44
8
12
34
1.73
9774--9810
2
18.5
2
100
0
74
51
0
0
48
1.00
13931--13962
15
2.1
15
94
0
55
43
18
9
28
1.81
16097--16148
10
4.8
10
80
15
59
13
48
26
11
1.77
16098--16164
33
2.1
32
86
8
91
14
49
23
11
1.77
18537--18616
24
3.2
25
72
15
67
18
26
2
52
1.58
18623--18692
21
3.2
21
75
4
59
20
22
4
52
1.63
18775--18842
26
2.6
27
81
6
68
26
19
4
50
1.66
18975--19029
16
3.4
16
74
18
60
18
23
1
56
1.51
18956--19039
32
2.6
32
92
0
141
17
25
4
52
1.64

Tables:   1

The End!