Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015916.1 Corchorus capsularis cultivar CVL-1 contig15937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8911

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5567--5633
28
2.4
28
79
13
77
74
0
20
4
0.99
5602--5631
15
1.9
16
93
6
53
80
0
20
0
0.72
5684--5750
19
3.7
19
72
24
72
35
11
17
34
1.87
5679--5747
34
2.0
34
94
0
120
36
11
17
34
1.86
6927--6993
6
10.8
6
93
6
116
83
0
16
0
0.64
7930--8360
69
6.2
69
86
4
548
27
27
16
28
1.97
7951--8360
137
3.0
136
85
5
536
27
28
16
27
1.97
8472--8794
47
6.9
47
91
1
490
21
22
19
36
1.95
8471--8794
94
3.5
94
95
2
546
21
22
19
36
1.95
8851--8910
11
5.2
11
82
9
57
83
8
8
0
0.82

Tables:   1

The End!