Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015920.1 Corchorus capsularis cultivar CVL-1 contig15941, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15315

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1676--1734
30
2.0
30
86
6
84
30
15
30
23
1.95
4988--5122
33
4.1
33
81
8
123
28
8
19
42
1.81
5514--5576
30
2.1
30
85
5
83
30
12
36
20
1.90
5620--5657
18
2.1
19
90
5
60
28
13
39
18
1.88
8781--8820
21
1.9
21
85
10
55
25
37
10
27
1.88
13852--13921
27
2.6
27
83
0
77
35
41
7
15
1.75
14165--14196
13
2.4
14
94
5
57
56
0
0
43
0.99
14245--14296
12
4.1
13
80
11
63
63
3
0
32
1.12
14245--14297
14
4.1
13
76
13
56
64
3
0
32
1.12
14253--14311
25
2.3
26
82
2
75
71
5
1
22
1.15
14253--14309
26
2.2
26
78
6
62
71
5
1
21
1.14
14346--14423
32
2.5
31
82
4
84
12
39
38
8
1.75
14625--14664
20
2.0
20
95
0
71
27
20
5
47
1.70
15233--15289
28
2.0
28
86
6
80
59
7
0
33
1.24

Tables:   1

The End!