Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015929.1 Corchorus capsularis cultivar CVL-1 contig15950, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21469

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
444--477
12
2.7
13
90
4
52
20
11
8
58
1.59
474--500
6
4.5
6
100
0
54
29
0
14
55
1.40
4366--4429
10
6.0
10
73
20
58
9
50
28
12
1.71
4362--4410
10
4.6
11
82
10
66
8
51
28
12
1.68
4362--4410
21
2.3
21
100
0
98
8
51
28
12
1.68
7606--7639
12
2.7
13
90
4
52
20
11
8
58
1.59
7636--7662
6
4.5
6
100
0
54
29
0
14
55
1.40
19323--19348
6
4.3
6
100
0
52
30
53
0
15
1.42
20175--20204
3
10.0
3
92
0
51
63
0
0
36
0.95
20355--20406
23
2.3
23
100
0
104
42
23
3
30
1.72
21250--21301
25
2.1
24
85
3
68
40
21
0
38
1.53
21318--21385
26
2.6
26
90
0
109
54
10
1
33
1.43

Tables:   1

The End!