Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015930.1 Corchorus capsularis cultivar CVL-1 contig15951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21112

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3527--3551
2
12.5
2
100
0
50
48
0
0
52
1.00
5308--5378
34
2.1
34
100
0
142
52
5
11
30
1.60
5308--5362
18
3.2
18
70
19
62
50
7
10
30
1.64
5325--5383
18
3.4
18
67
9
59
54
3
10
32
1.51
5544--5805
107
2.5
104
91
2
409
41
8
8
41
1.65
19953--19987
6
5.8
6
86
0
52
31
0
0
68
0.90

Tables:   1

The End!