Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015932.1 Corchorus capsularis cultivar CVL-1 contig15953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41267

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2690--2717
4
7.0
4
100
0
56
50
0
0
50
1.00
7628--7701
33
2.2
33
92
0
130
33
8
18
39
1.81
8088--8150
30
2.1
30
91
5
101
31
17
30
20
1.96
10767--10913
72
2.0
72
96
0
267
19
15
16
48
1.81
20623--20665
22
1.9
23
81
13
54
55
4
2
37
1.33
21999--22023
10
2.5
10
100
0
50
44
12
16
28
1.83
23476--23512
2
19.0
2
84
15
51
51
2
0
45
1.15
24470--24513
16
2.8
16
85
0
70
4
13
40
40
1.65
25613--25655
16
2.7
16
79
13
52
37
37
11
13
1.82
26618--26702
15
5.4
16
80
10
95
43
37
12
5
1.68
26633--26702
31
2.3
31
85
14
92
41
41
12
4
1.63
32576--32616
19
2.2
19
100
0
82
29
14
19
36
1.92

Tables:   1

The End!