Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015941.1 Corchorus capsularis cultivar CVL-1 contig15962, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18880

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--374
22
16.0
22
74
14
218
55
5
20
18
1.63
45--383
43
7.7
42
77
11
274
56
6
19
17
1.62
30--417
21
17.8
21
71
16
170
55
6
19
18
1.64
262--317
15
3.9
15
74
9
62
57
5
21
16
1.59
14877--14921
2
24.0
2
79
20
53
48
0
2
48
1.13
16081--16141
25
2.5
25
89
7
90
34
24
1
39
1.65
16149--16216
26
2.6
26
90
0
109
54
10
1
33
1.43
17411--17437
2
13.5
2
100
0
54
51
0
0
48
1.00
17796--17831
18
2.0
18
88
0
54
58
19
0
22
1.40

Tables:   1

The End!