Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015944.1 Corchorus capsularis cultivar CVL-1 contig15965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19350

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--876
101
2.4
100
93
2
407
38
18
16
27
1.92
8615--8680
30
2.2
30
94
0
114
9
25
43
21
1.81
9674--9789
33
3.6
33
82
3
139
40
18
8
31
1.81
12308--12366
30
2.0
30
89
0
91
8
25
45
20
1.79
16977--17010
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!