Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015948.1 Corchorus capsularis cultivar CVL-1 contig15969, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28853

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
211--252
18
2.3
18
88
8
59
19
19
2
59
1.49
5255--5291
2
18.5
2
100
0
74
48
0
0
51
1.00
7548--7795
124
2.0
124
100
0
496
40
12
23
24
1.88
7853--7912
31
1.9
32
86
3
86
40
11
8
40
1.72
8583--8617
16
2.2
16
94
0
61
40
2
28
28
1.71
17161--17215
14
3.9
14
77
15
51
47
10
0
41
1.39
17177--17216
2
20.0
2
89
0
62
50
5
0
45
1.23
17265--17314
24
2.1
24
100
0
100
22
12
8
58
1.59
25282--25406
66
1.9
66
83
9
166
45
8
14
32
1.74
25417--25472
25
2.2
25
93
3
94
58
7
7
26
1.50
28358--28392
17
2.1
17
88
0
52
37
2
14
45
1.59

Tables:   1

The End!