Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015954.1 Corchorus capsularis cultivar CVL-1 contig15975, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19533

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2273--2321
25
2.0
25
84
8
64
40
0
2
57
1.10
9614--9657
21
2.1
21
86
0
61
18
34
9
38
1.82
9735--9793
25
2.4
25
88
5
86
35
27
0
37
1.57
10247--10319
26
2.9
24
76
14
67
34
0
8
57
1.28
10241--10376
18
7.9
18
66
19
76
31
1
8
58
1.36
13618--13686
33
2.1
33
83
2
84
53
13
1
31
1.48
14720--14745
13
2.0
13
100
0
52
76
7
7
7
1.15
15037--15084
23
2.1
23
100
0
96
35
25
0
39
1.56
19502--19533
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!