Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015955.1 Corchorus capsularis cultivar CVL-1 contig15976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18102

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2524--2724
98
2.1
98
99
0
393
15
10
15
57
1.65
2720--2758
12
3.2
13
82
10
55
33
0
10
56
1.33
3016--3099
25
3.4
25
86
3
118
34
27
1
36
1.65
3372--3408
15
2.5
15
90
0
56
32
0
10
56
1.34
3571--3650
14
5.9
14
72
18
71
32
0
10
57
1.32
3573--3649
26
3.0
26
77
9
86
32
0
10
57
1.33
3914--4009
30
3.4
27
83
13
99
31
14
43
10
1.79
3935--4009
30
2.5
30
95
0
132
30
16
44
9
1.79
9706--9787
15
5.5
15
68
18
64
53
9
1
35
1.42
9776--9831
27
2.1
26
87
9
78
67
5
1
25
1.21
12729--12843
42
2.8
41
80
9
128
19
12
27
40
1.87
17509--17588
27
3.0
27
90
0
115
17
18
22
41
1.90
18027--18077
20
2.6
19
78
6
57
70
5
5
17
1.28
18030--18080
19
2.5
23
73
26
60
70
5
5
17
1.28

Tables:   1

The End!