Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015958.1 Corchorus capsularis cultivar CVL-1 contig15979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34909

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2957--2987
2
15.5
2
100
0
62
51
0
0
48
1.00
6912--6958
22
2.1
22
96
0
85
19
14
21
44
1.86
16889--18362
54
26.9
54
85
6
1788
49
6
17
26
1.70
16889--18362
166
9.0
162
85
5
1808
49
6
17
26
1.70
17522--17611
28
3.2
28
65
20
80
50
5
22
22
1.70
17550--17638
27
3.3
27
64
14
74
46
7
20
25
1.77
20335--21395
442
2.4
437
85
3
1387
41
14
14
30
1.85
26033--26138
50
2.1
50
98
1
203
29
20
16
33
1.95
26139--26243
31
3.5
30
72
11
79
34
23
13
28
1.93
26970--27032
29
2.2
30
80
8
76
41
9
3
46
1.52
28499--28540
21
2.0
22
90
4
68
2
19
0
78
0.86
28505--28559
22
2.5
21
80
13
58
3
21
0
74
0.97
34750--34850
29
3.4
29
80
4
103
14
29
17
37
1.90

Tables:   1

The End!