Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015963.1 Corchorus capsularis cultivar CVL-1 contig15984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9842

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2516--2549
8
4.1
8
85
7
50
23
2
14
58
1.50
3517--3590
33
2.2
34
81
11
91
8
28
40
22
1.83
3560--3615
23
2.4
23
78
0
58
14
32
32
21
1.93
4619--5164
114
4.8
113
90
2
790
32
20
23
23
1.97
4619--5164
227
2.4
226
88
3
783
32
20
23
23
1.97
9411--9438
12
2.3
12
100
0
56
35
7
7
50
1.57

Tables:   1

The End!