Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015970.1 Corchorus capsularis cultivar CVL-1 contig15991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9624

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
300--336
17
2.1
18
95
5
67
27
10
35
27
1.90
4039--4079
21
2.0
21
95
0
73
41
14
7
36
1.74
4376--4730
130
2.7
130
93
0
611
40
12
10
36
1.77
6847--6876
7
4.3
7
95
0
51
86
3
10
0
0.67
7216--7254
13
3.3
11
86
13
51
76
0
23
0
0.78

Tables:   1

The End!