Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015978.1 Corchorus capsularis cultivar CVL-1 contig15999, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11418

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
758--809
3
17.3
3
100
0
104
65
0
0
34
0.93
3259--3302
21
2.2
20
83
4
52
31
6
4
56
1.46
11356--11403
11
4.3
11
78
5
51
0
10
4
85
0.73
11363--11409
12
3.9
12
75
10
51
0
12
2
85
0.70
11364--11409
23
2.0
24
86
4
67
0
13
2
84
0.71
11357--11408
19
2.9
18
83
8
70
0
11
3
84
0.74

Tables:   1

The End!