Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015985.1 Corchorus capsularis cultivar CVL-1 contig16006, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40117

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9038--9103
25
2.6
25
83
4
71
22
25
24
27
2.00
10491--10556
33
2.0
33
84
0
87
24
21
13
40
1.89
12618--12815
108
1.8
108
82
8
260
42
8
11
37
1.71
17462--17509
20
2.3
21
89
3
71
18
4
4
72
1.17
25506--25551
18
2.4
19
80
16
51
54
0
0
45
0.99
28178--28219
21
2.0
21
85
0
57
40
11
14
33
1.82
30167--30227
32
1.9
32
96
0
113
36
24
6
32
1.81
38125--38156
16
2.0
16
100
0
64
31
12
6
50
1.65
39423--39447
12
2.1
12
100
0
50
48
0
16
36
1.46

Tables:   1

The End!