Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015991.1 Corchorus capsularis cultivar CVL-1 contig16012, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23996

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--1127
27
2.5
27
77
0
71
44
25
11
17
1.83
2848--2899
22
2.4
22
84
9
70
38
0
7
53
1.30
6069--6137
31
2.2
31
89
0
102
49
2
15
31
1.60
6661--6688
2
14.0
2
100
0
56
50
0
0
50
1.00
8592--8872
153
1.8
152
84
5
388
53
4
9
33
1.52
9157--9208
3
17.3
3
95
0
95
65
0
0
34
0.93

Tables:   1

The End!