Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001600.1 Corchorus capsularis cultivar CVL-1 contig01600, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1513

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
122--181
10
5.6
11
77
13
63
48
0
8
43
1.33
122--187
22
3.3
19
76
15
55
48
0
7
43
1.31
142--186
22
2.0
22
95
0
81
48
0
4
46
1.22
145--191
22
2.2
22
88
3
69
53
0
4
42
1.20
1141--1175
16
2.2
16
89
0
52
20
11
11
57
1.64

Tables:   1

The End!