Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016002.1 Corchorus capsularis cultivar CVL-1 contig16023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25005

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1169--1202
8
4.1
8
85
7
50
23
2
14
58
1.50
5280--5361
34
2.4
34
97
0
155
31
12
7
48
1.68
5679--5791
58
1.9
58
85
0
154
35
7
26
30
1.85
8090--9283
330
3.6
330
80
5
1312
36
17
13
32
1.89
9338--9403
27
2.4
27
85
7
80
46
1
6
45
1.37
9327--9504
94
1.9
95
84
8
245
52
3
8
35
1.50
9712--9949
115
2.1
117
83
9
310
49
2
13
34
1.57
10070--10128
30
1.9
31
96
3
111
27
18
6
47
1.74
10255--10349
37
2.6
37
84
0
136
13
20
11
54
1.69
13140--13187
22
2.2
22
96
0
87
43
4
6
45
1.48
13141--13183
11
3.9
11
90
0
68
41
4
6
46
1.51
13987--14143
74
2.1
74
90
2
244
40
8
29
21
1.83
14213--14252
20
2.0
20
100
0
80
50
0
10
40
1.36
14243--14292
3
16.3
3
88
12
75
64
0
0
36
0.94
14243--14298
12
4.8
11
87
12
69
62
0
0
37
0.95
21905--22475
288
2.0
288
99
0
1124
32
18
13
35
1.89
22966--23120
60
2.6
59
83
8
197
35
13
18
32
1.89
23178--23309
60
2.2
59
85
8
169
33
18
14
34
1.91
24292--24337
20
2.3
20
100
0
92
41
28
19
10
1.85

Tables:   1

The End!