Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016003.1 Corchorus capsularis cultivar CVL-1 contig16024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28807

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--64
12
2.8
12
95
0
57
57
9
15
18
1.63
1012--1036
3
8.3
3
100
0
50
36
32
0
32
1.58
11427--11482
21
2.8
20
75
5
51
30
19
7
42
1.78
16626--17083
199
2.3
197
88
3
661
34
14
16
34
1.89
22058--22088
16
1.9
16
93
0
53
54
0
9
35
1.33
28687--28753
2
33.5
2
100
0
134
49
0
50
0
1.00
28756--28807
4
13.0
4
100
0
104
25
25
25
25
2.00

Tables:   1

The End!